Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D13TBC1 domain family member 13. (400 aa)    
Predicted Functional Partners:
tbc1d19
TBC1 domain family, member 19.
      
 0.781
rab35
RAB35, member RAS oncogene family b.
     
 0.775
LOC110955130
Si:dkey-16l2.16.
     
 0.775
spout1
SPOUT domain containing methyltransferase 1.
      
 0.772
LOC110958564
TBC1 domain family, member 7.
      
 0.702
pex6
Peroxisomal biogenesis factor 6.
      
 0.686
ift27
Intraflagellar transport 27 homolog (Chlamydomonas).
     
 0.678
ENSAPOP00000019755
Dolichol kinase.
      
 0.655
evi5
Ecotropic viral integration site 5b.
      
 0.649
LOC110967292
Si:ch211-239f4.1.
      
 0.649
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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