STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970195Uncharacterized protein. (598 aa)    
Predicted Functional Partners:
LOC110948607
DGCR8 microprocessor complex subunit.
   
 0.978
ENSAPOP00000016843
DRBM domain-containing protein.
 
     0.938
mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.921
mrpl27
Mitochondrial ribosomal protein L27.
  
 
 0.915
ENSAPOP00000021355
Mitochondrial ribosomal protein S6.
   
 
 0.911
mrpl19
Mitochondrial ribosomal protein L19.
  
 
 0.910
mrpl17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.906
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.902
mrps16
Mitochondrial ribosomal protein S16.
  
 
 0.900
mrpl20
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
  
 
 0.898
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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