Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc46a3Solute carrier family 46 member 3. (477 aa)    
Predicted Functional Partners:
LOC110970219
Malate synthase-like.
     
 0.851
pla2g4a
Phospholipase A2.
    
 0.769
ints1
Integrator complex subunit 1.
    
 0.617
ints9
Integrator complex subunit 9.
    
 0.610
ints11
Integrator complex subunit 11.
    
 0.609
ints13
Integrator complex subunit 13.
    
 0.582
ints10
Integrator complex subunit 10.
    
 0.579
ints3
Integrator complex subunit 3.
    
 0.579
ints7
Integrator complex subunit 7.
    
 0.579
LOC110955902
Uncharacterized protein; Belongs to the CTL (choline transporter-like) family.
     
 0.574
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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