STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110957597Membrane associated guanylate kinase, WW and PDZ domain containing 2a. (1136 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.859
igsf5
Immunoglobulin superfamily, member 5a.
    
 0.783
ENSAPOP00000023646
PDZ domain-containing protein.
 
      0.721
rapgef6
Rap guanine nucleotide exchange factor (GEF) 6.
    
 0.711
rapgef2
Rap guanine nucleotide exchange factor (GEF) 2.
    
 0.711
LOC110961776
Transmembrane phosphatase with tensin homology.
    
 0.695
LOC110945409
Phosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family.
    
 0.695
ENSAPOP00000034206
Phosphatase tensin-type domain-containing protein.
    
 0.695
LOC110949577
FERM domain-containing protein.
    
 0.690
frmd1
FERM domain-containing protein.
    
 0.690
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.