Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC110948931DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (620 aa)    
Predicted Functional Partners:
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.939
LOC110970195
Uncharacterized protein.
  
 0.930
LOC110962617
Drosha ribonuclease III.
  
 0.930
ENSAPOP00000016843
DRBM domain-containing protein.
  
 0.930
sf1
Splicing factor 1.
   
 0.917
dkc1
Dyskeratosis congenita 1, dyskerin.
  
 
 0.913
ENSAPOP00000000328
Uncharacterized protein.
  
 0.911
ENSAPOP00000000378
DEAH (Asp-Glu-Ala-His) box helicase 9.
  
 0.911
ENSAPOP00000027658
annotation not available
  
 0.911
rbm34
RNA binding motif protein 34.
   
 0.889
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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