Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110954110Uncharacterized protein. (372 aa)    
Predicted Functional Partners:
LOC110957541
Tenascin C.
    
  0.831
ENSAPOP00000010144
Fibronectin type-III domain-containing protein.
    
  0.831
tnr
Tenascin R (restrictin, janusin).
    
  0.831
tnn
Tenascin N.
    
  0.831
itga9
Integrin, alpha 9; Belongs to the integrin alpha chain family.
     
  0.786
itga8
Integrin, alpha 8; Belongs to the integrin alpha chain family.
     
  0.786
itgb6
Integrin beta; Belongs to the integrin beta chain family.
     
  0.786
LOC110969783
Uncharacterized protein.
    
  0.735
ENSAPOP00000034208
Fibrinogen C-terminal domain-containing protein.
    
  0.735
LOC110954669
Integrin beta; Belongs to the integrin beta chain family.
     
  0.708
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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