Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
LOC110968365Spectrin beta chain; Belongs to the spectrin family. (2034 aa)    
Predicted Functional Partners:
sptan1
Spectrin alpha, non-erythrocytic 1.
   
 0.964
LOC110962835
Spectrin beta chain; Belongs to the spectrin family.
  
  
 
0.894
ENSAPOP00000001524
PH domain-containing protein.
 
     0.872
sptbn4
Spectrin, beta, non-erythrocytic 4b.
  
  
 
0.862
LOC110970474
PH domain-containing protein.
     
  0.687
LOC110961815
Glutamate receptor, metabotropic 5a.
     
  0.640
LOC110957981
Glutamate receptor, metabotropic 1b.
     
  0.640
GRM5
Glutamate metabotropic receptor 5.
     
  0.640
grm1
Glutamate receptor, metabotropic 1a.
     
  0.640
copb1
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.624
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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