Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mrps18aUncharacterized protein. (201 aa)    
Predicted Functional Partners:
mrps18c
Mitochondrial ribosomal protein S18C.
   
 0.999
mrps18b
Mitochondrial ribosomal protein S18B.
   
 0.994
mrpl4
Mitochondrial ribosomal protein L4.
   
 
 0.993
mrpl13
Mitochondrial ribosomal protein L13.
   
 
 0.992
mrps30
Mitochondrial ribosomal protein S30.
   
 0.992
mrps23
Mitochondrial ribosomal protein S23.
   
 0.992
mrpl47
Mitochondrial ribosomal protein L47.
   
 
 0.991
mrps16
Mitochondrial ribosomal protein S16.
   
 0.990
mrpl27
Mitochondrial ribosomal protein L27.
   
 
 0.990
ENSAPOP00000024713
Mitochondrial ribosomal protein S28.
   
 0.990
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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