STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110959423SH3 domain-containing protein. (107 aa)    
Predicted Functional Partners:
LOC110953218
Actinin, alpha 1.
   
 0.509
ACTN4
Uncharacterized protein.
   
 0.509
actn3
Actinin alpha 3b.
   
 0.509
LOC110954064
Actinin, alpha 2b.
   
 0.509
LOC110966632
Zyxin.
    
 
 0.502
tmod4
Tropomodulin 4 (muscle).
   
 0.488
tmod3
Tropomodulin 2.
   
 0.488
tmod1
Tropomodulin 1.
   
 0.488
LOC110956675
Leiomodin 1b (smooth muscle).
   
 0.482
lmod2
Leiomodin 2 (cardiac) b.
   
 0.477
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.