STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948308Zinc finger and BTB domain containing 48. (538 aa)    
Predicted Functional Partners:
LOC110969546
Uncharacterized protein.
   
    0.688
LOC110945185
LIP1 domain-containing protein.
   
    0.688
ENSAPOP00000024610
Uncharacterized protein.
    
  0.681
ENSAPOP00000028898
Uncharacterized protein.
    
  0.681
terf1
Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat.
    
 0.631
LOC110948645
BRCA1 associated RING domain 1.
    
  0.631
ENSAPOP00000006159
Uncharacterized protein.
    
  0.628
nme9
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.611
sgk3
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
  0.589
YTHDC2
YTH domain containing 2.
    
  0.584
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.