Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC110958152Ribonucleoprotein, PTB-binding 2. (834 aa)    
Predicted Functional Partners:
cnot11
CCR4-NOT transcription complex, subunit 11.
   
   0.963
cnot10
CCR4-NOT transcription complex, subunit 10.
    
   0.934
LOC110955783
Uncharacterized protein.
   
 0.876
PTBP2
Polypyrimidine tract binding protein 2a.
   
 0.876
LOC110966787
Polypyrimidine tract binding protein 3.
   
 0.876
LOC110968942
Uncharacterized protein.
   
 0.876
LOC110972943
Polypyrimidine tract binding protein 1a.
   
 0.876
cnot1
CCR4-NOT transcription complex, subunit 1.
   
   0.839
eif4h
Eukaryotic translation initiation factor 4h.
   
  0.813
LOC110958656
Vinculin a.
    
 
 0.808
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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