STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110965966Homeobox domain-containing protein. (616 aa)    
Predicted Functional Partners:
LOC110964172
Mothers against decapentaplegic homolog.
    
 0.929
smad3
Mothers against decapentaplegic homolog.
    
 0.929
smad2
Mothers against decapentaplegic homolog.
    
 0.929
LOC110963214
Mothers against decapentaplegic homolog.
    
 0.929
TSHZ1
Teashirt zinc finger homeobox 1.
    
 0.641
LOC110948203
Teashirt zinc finger homeobox 3a.
    
 0.641
LOC110960460
Teashirt zinc finger homeobox 3b.
    
 0.641
tshz2
Teashirt zinc finger homeobox 2.
    
 0.641
LOC110965654
Teashirt zinc finger homeobox 1.
    
 0.641
ENSAPOP00000014960
Integrator complex subunit 8.
    
 0.635
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.