Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110961777Rho GTPase activating protein 23b. (1557 aa)    
Predicted Functional Partners:
ENSAPOP00000033675
Uncharacterized protein.
    
 
 0.884
ccdc51
Coiled-coil domain containing 51.
      
 0.653
ccdc85c
Coiled-coil domain containing 85C, b.
    
 
 0.652
LOC110951510
Ras homolog family member F.
    
 0.622
synj1
Synaptojanin 1.
     
 0.617
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
  0.614
inpp5f
Inositol polyphosphate-5-phosphatase F.
     
  0.614
ENSAPOP00000007219
Uncharacterized protein.
    
 
 0.556
LOC110958891
Coiled-coil domain containing 85A, like.
    
 
 0.556
RND1
Rho family GTPase 1.
    
 0.552
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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