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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110955280Si:dkey-202e22.2. (630 aa)    
Predicted Functional Partners:
unc5a
Unc-5 netrin receptor A.
     
 0.728
itgb4
Integrin beta.
    
 0.699
ripk4
Receptor-interacting serine-threonine kinase 4.
    
 0.687
ikbke
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.686
tbk1
TANK-binding kinase 1.
   
 0.678
LOC110967329
DCC netrin 1 receptor.
   
 0.677
NEO1
Neogenin 1.
   
 0.677
ENSAPOP00000027846
Ig-like domain-containing protein.
   
 0.677
LOC110971131
Neogenin_C domain-containing protein.
   
 0.677
LOC110958655
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.675
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.