STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nbasNeuroblastoma amplified sequence. (1847 aa)    
Predicted Functional Partners:
zw10
Zw10 kinetochore protein.
    
 0.999
rint1
RAD50 interactor 1.
    
 0.996
stx18
Syntaxin 18.
    
 0.993
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.992
rps6kc1
Ribosomal protein S6 kinase polypeptide 1.
   
 0.970
snx15
Sorting nexin 15.
    
 0.968
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
    
 0.956
arcn1
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.882
LOC110958454
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
 0.876
LOC110964737
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
    
 0.876
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.