Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nbasNeuroblastoma amplified sequence. (1847 aa)    
Predicted Functional Partners:
rint1
RAD50 interactor 1.
    
 0.999
zw10
Zw10 kinetochore protein.
   
 0.999
stx18
Syntaxin 18.
    
 0.998
use1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
 0.996
napg
N-ethylmaleimide-sensitive factor attachment protein, gamma b.
    
 0.995
scfd2
Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.988
LOC110958454
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
 0.963
LOC110964737
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
    
 0.963
arcn1
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.952
vti1b
Vesicle transport through interaction with t-SNAREs 1B.
    
 
 0.952
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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