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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kctd9Potassium channel tetramerization domain containing 9a. (389 aa)    
Predicted Functional Partners:
mocs1
Molybdenum cofactor synthesis 1.
  
 
  0.844
top2b
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.839
top2a
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.
   
 
 0.839
hddc3
HD domain containing 3.
    
  0.835
kmt5b
Lysine methyltransferase 5B.
    
  0.772
LOC110951796
SET domain-containing protein.
    
  0.772
cpped1
Calcineurin-like phosphoesterase domain containing 1.
    
  0.722
acp5
Tartrate-resistant acid phosphatase type 5.
    
  0.722
acp7
Purple acid phosphatase.
    
  0.722
ENSAPOP00000008705
Uncharacterized protein.
   
 0.681
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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