Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
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[Homology]
Score
kctd9Potassium channel tetramerization domain containing 9a. (389 aa)    
Predicted Functional Partners:
LOC110960747
Potassium channel tetramerization domain containing 2.
    
 
 0.879
LOC110960410
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 
 0.867
CUL3
Cullin 3; Belongs to the cullin family.
    
 
 0.867
nup35
Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.
    
   0.809
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
   0.767
kctd5
Potassium channel tetramerization domain containing 5a.
    
 
 0.761
LOC110965440
Potassium channel tetramerization domain containing 17.
    
 
 0.761
hddc3
HD domain containing 3.
    
 0.740
mocs1
Molybdenum cofactor synthesis 1.
    
  0.698
ankrd39
Ankyrin repeat domain 39.
     
 0.697
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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