STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110956456Uncharacterized protein. (319 aa)    
Predicted Functional Partners:
BRK1
BRICK1 subunit of SCAR/WAVE actin nucleating complex.
    
 0.991
nckap1
NCK-associated protein 1.
   
 0.982
nckap1l
NCK associated protein 1 like.
   
 0.981
LOC110951980
Abl-interactor 1b.
   
 0.980
wasf1
WASP family member 1.
   
 0.977
ABI1
Abl-interactor 1a.
   
 0.975
ENSAPOP00000018036
WASP family member 2.
   
 0.971
fmr1
Fragile X mental retardation 1.
    
 0.959
LOC110969831
Zgc:109889.
   
 0.952
wasf3
WASP family member 3b.
   
 0.952
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.