Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GGA1Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (655 aa)    
Predicted Functional Partners:
ENSAPOP00000010389
GAT domain-containing protein.
   
  0.948
ENSAPOP00000010393
VHS domain-containing protein.
   
  0.948
gga3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.
   
  0.948
rabep1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.926
igf2r
Insulin-like growth factor 2 receptor.
    
 
 0.897
sorl1
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 
 0.879
rabgef1
Uncharacterized protein.
   
 0.876
LOC110960074
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.876
LOC110968328
Uncharacterized protein.
     
  0.872
eprs1
Glutamyl-prolyl-tRNA synthetase.
     
  0.869
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.