STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap298Cilia and flagella associated protein 298. (290 aa)    
Predicted Functional Partners:
cfap300
Cilia and flagella associated protein 300.
    
 
 0.559
wdr92
WD repeat domain 92.
  
   
 0.557
zmynd10
Zinc finger, MYND-type containing 10.
    
 
 0.540
dnaaf1
Dynein assembly factor 1, axonemal.
      
 0.520
DNAAF5
Dynein axonemal assembly factor 5.
      
 0.519
lrrc6
Leucine rich repeat containing 6.
      
 0.514
dnaaf3
Dynein, axonemal, assembly factor 3 like.
      
 0.514
dnali1
Dynein, axonemal, light intermediate chain 1.
  
   
 0.472
dnai1
Dynein, axonemal, intermediate chain 1, paralog 2.
   
  
 0.470
ccdc65
NYD-SP28 domain-containing protein.
      
 0.461
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.