STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110955271Snail family zinc finger 1a. (255 aa)    
Predicted Functional Partners:
LOC110948575
Snail family zinc finger 1b.
  
  
 
0.895
snai2
Snail family zinc finger 2.
  
 
 
0.818
ENSAPOP00000020418
Uncharacterized protein.
  
 
 
0.745
kpnb1
Karyopherin (importin) beta 1.
    
   0.556
rcor1
REST corepressor 1.
    
 0.479
rcor2
REST corepressor 2.
    
 0.479
LOC110962055
REST corepressor 3.
    
 0.479
fbxw11
F-box and WD repeat domain containing 11a.
    
 
 0.437
irak1
Protein kinase domain-containing protein.
    
 
 0.426
maob
Amine oxidase.
    
 0.413
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.