STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctnsCystinosin, lysosomal cystine transporter. (409 aa)    
Predicted Functional Partners:
LOC110955360
Uncharacterized protein.
   
 
  0.811
sel1l
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
  0.811
LOC110969073
Si:dkey-24p1.6.
   
 
  0.811
dele1
Uncharacterized protein.
   
 
  0.771
LOC110952312
Cytochrome c oxidase assembly factor 7.
   
 
  0.736
LOC110966504
Solute carrier family 66 member 1.
    
 
 0.604
shpk
Sedoheptulokinase.
   
  
 0.568
LOC110950435
Uncharacterized protein.
      
 0.565
btg3
B-cell translocation gene 3.
      
 0.525
cln3
Battenin.
   
  
 0.509
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.