STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001571Uncharacterized protein. (372 aa)    
Predicted Functional Partners:
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
  0.662
lrit3
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
  0.662
LOC110963843
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
  0.662
LOC110958732
Uncharacterized protein.
   
 0.650
ENSAPOP00000010996
Protein tyrosine phosphatase non-receptor type 6.
   
 0.642
ENSAPOP00000028369
SH2 domain-containing protein.
   
 0.642
ENSAPOP00000031993
Uncharacterized protein.
   
 0.639
ptpn11
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
 0.630
ENSAPOP00000017225
SH2 domain-containing protein.
   
 0.630
ENSAPOP00000017255
SH2 domain-containing protein.
   
 0.630
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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