STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zc3h11aZinc finger CCCH-type containing 11A. (853 aa)    
Predicted Functional Partners:
sarnp
SAP domain containing ribonucleoprotein.
    
 0.956
poldip3
Polymerase (DNA-directed), delta interacting protein 3.
     
 0.927
chtop
Chromatin target of PRMT1a.
    
 0.871
zc3h13
Zinc finger CCCH-type containing 13.
   
 0.865
thoc2
THO complex 2.
   
 0.848
thoc5
THO complex 5.
    
 0.839
LOC110955211
Ash1 (absent, small, or homeotic)-like (Drosophila).
   
  
 0.831
ALYREF
Aly/REF export factor.
     
 0.827
USP34
Ubiquitin specific peptidase 34; Belongs to the peptidase C19 family.
   
   0.813
thoc7
THO complex 7.
    
 0.803
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.