Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948924Netrin 1b. (600 aa)    
Predicted Functional Partners:
unc5b
Unc-5 netrin receptor B.
    
 0.983
unc5a
Unc-5 netrin receptor A.
    
 0.973
LOC110966009
Unc-5 netrin receptor C.
    
 0.941
LOC110966092
Uncharacterized protein.
    
 0.941
LOC110967329
DCC netrin 1 receptor.
    
 0.917
NEO1
Neogenin 1.
    
 0.917
ENSAPOP00000027846
Ig-like domain-containing protein.
    
 0.917
LOC110971131
Neogenin_C domain-containing protein.
    
 0.917
LOC110965971
Unc-5 netrin receptor Db.
    
 0.889
LOC110961325
Unc-5 netrin receptor Db.
    
 0.889
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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