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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948924Netrin 1b. (600 aa)    
Predicted Functional Partners:
unc5b
Unc-5 netrin receptor B.
    
 0.906
LOC110967329
DCC netrin 1 receptor.
    
 0.875
NEO1
Neogenin 1.
    
 0.875
ENSAPOP00000027846
Ig-like domain-containing protein.
    
 0.875
LOC110971131
Neogenin_C domain-containing protein.
    
 0.875
unc5a
Unc-5 netrin receptor A.
    
 0.874
LOC110955450
Immunoglobulin superfamily, DCC subclass, member 4.
    
 0.874
lamc1
Laminin, gamma 1.
 
   
 
0.845
igdcc3
Immunoglobulin superfamily, DCC subclass, member 3.
    
 0.786
LOC110965734
Si:ch211-57n23.4.
    
 0.786
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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