Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
adamtsl2ADAMTS-like 2. (903 aa)    
Predicted Functional Partners:
pofut2
Protein O-fucosyltransferase 2.
     
 0.745
LOC110955236
Beta 3-glucosyltransferase a.
    
 0.594
LOC110953189
Beta 3-glucosyltransferase.
    
 0.594
tsr3
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.562
spon2
Spondin 2b, extracellular matrix protein.
     
 0.496
foxf1
Forkhead box F1.
      
 0.440
LTBP3
Latent transforming growth factor beta binding protein 3.
    
 0.438
ENSAPOP00000016238
Uncharacterized protein.
    
 0.438
ltbp2
Uncharacterized protein.
    
 0.438
ltbp1
Latent transforming growth factor beta binding protein 1.
    
 0.438
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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