STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptpraProtein tyrosine phosphatase receptor type A. (844 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
   
 0.980
il1rap
Uncharacterized protein.
    
 0.837
LOC110964442
SLIT and NTRK-like family, member 2.
    
 0.782
LOC110971480
Ig-like domain-containing protein.
    
  0.738
LOC110958527
Leucine rich repeat containing 24.
    
  0.738
LOC110955923
Tyrosine-protein kinase.
   
 0.731
LOC110952284
Tyrosine-protein kinase.
   
 0.731
LOC110950451
Tyrosine-protein kinase.
   
 0.731
LOC110954237
Tyrosine-protein kinase.
   
 0.731
LOC110962283
Uncharacterized protein.
    
 0.721
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.