Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001606R-spondin 2. (219 aa)    
Predicted Functional Partners:
znrf3
Zinc and ring finger 3.
    
 0.996
lgr4
Leucine-rich repeat containing G protein-coupled receptor 4.
   
 0.991
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
   
 0.989
rnf43
Ring finger protein 43.
    
 0.988
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
    
 0.940
rspo1
R-spondin 1.
     
  0.873
LOC110948733
R-spondin 3.
     
  0.873
LOC110971480
Ig-like domain-containing protein.
   
  0.851
LOC110958527
Leucine rich repeat containing 24.
   
  0.851
rnf126
RING-type domain-containing protein.
    
 0.805
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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