Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hand2Heart and neural crest derivatives expressed 2. (251 aa)    
Predicted Functional Partners:
gata4
GATA binding protein 4.
   
 0.917
LOC110965922
T-box transcription factor 5a.
    
 0.894
nkx2-5
NK2 homeobox 5.
   
 0.822
HAND1
Heart and neural crest derivatives expressed 1.
   
   0.804
gata6
GATA binding protein 6.
   
 0.792
ENSAPOP00000015762
Uncharacterized protein.
    
 0.788
smyd1
Uncharacterized protein.
    
 0.788
gata5
GATA binding protein 5.
   
 0.783
ENSAPOP00000004334
Uncharacterized protein.
    
 0.776
LOC110967144
Transcription factor 3a.
    
 0.776
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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