Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RING1Ring finger protein 1. (387 aa)    
Predicted Functional Partners:
ENSAPOP00000018748
Bmi1 polycomb ring finger oncogene 1a.
    
0.987
PCGF3
Polycomb group ring finger 3.
    
 0.984
pcgf2
Polycomb group ring finger 2.
    
0.983
pcgf1
Polycomb group ring finger 1.
   
0.983
pcgf5
Polycomb group ring finger 5a.
    
 0.981
LOC110961503
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
 0.977
cbx4
Chromobox 4.
    
 0.977
CBX2
Chromobox 2.
    
 0.976
LOC110948480
Chromobox homolog 2 (Drosophila Pc class).
    
 0.976
pcgf6
Polycomb group ring finger 6.
   
 0.973
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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