scaf4 protein (Acanthochromis polyacanthus) - STRING interaction network

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Score

scaf4

SR-related CTD-associated factor 4a. (1114 aa)

Predicted Functional Partners:

LOC110962292

0.903

exosc10

0.874

ncbp2

0.829

polr2b

0.819

NCBP1

0.814

polr2c

0.811

mtrex

0.809

pcf11

0.802

supt5h

0.796

xrn2

0.776

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC110962292	NCBP1	ENSAPOP00000004916	ENSAPOP00000006142	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nuclear cap binding protein subunit 1.	0.826
LOC110962292	exosc10	ENSAPOP00000004916	ENSAPOP00000010733	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Exosome component 10.	0.875
LOC110962292	ncbp2	ENSAPOP00000004916	ENSAPOP00000029936	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.814
LOC110962292	pcf11	ENSAPOP00000004916	ENSAPOP00000032660	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	PCF11 cleavage and polyadenylation factor subunit.	0.987
LOC110962292	polr2b	ENSAPOP00000004916	ENSAPOP00000016482	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
LOC110962292	polr2c	ENSAPOP00000004916	ENSAPOP00000009430	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.999
LOC110962292	scaf4	ENSAPOP00000004916	ENSAPOP00000001621	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	SR-related CTD-associated factor 4a.	0.903
LOC110962292	supt5h	ENSAPOP00000004916	ENSAPOP00000010146	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Transcription elongation factor SPT5.	0.997
LOC110962292	xrn2	ENSAPOP00000004916	ENSAPOP00000026195	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.944
NCBP1	LOC110962292	ENSAPOP00000006142	ENSAPOP00000004916	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.826
NCBP1	exosc10	ENSAPOP00000006142	ENSAPOP00000010733	Nuclear cap binding protein subunit 1.	Exosome component 10.	0.853
NCBP1	mtrex	ENSAPOP00000006142	ENSAPOP00000006056	Nuclear cap binding protein subunit 1.	Mtr4 exosome RNA helicase.	0.990
NCBP1	ncbp2	ENSAPOP00000006142	ENSAPOP00000029936	Nuclear cap binding protein subunit 1.	Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]	0.999
NCBP1	pcf11	ENSAPOP00000006142	ENSAPOP00000032660	Nuclear cap binding protein subunit 1.	PCF11 cleavage and polyadenylation factor subunit.	0.958
NCBP1	polr2b	ENSAPOP00000006142	ENSAPOP00000016482	Nuclear cap binding protein subunit 1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.914
NCBP1	polr2c	ENSAPOP00000006142	ENSAPOP00000009430	Nuclear cap binding protein subunit 1.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.740
NCBP1	scaf4	ENSAPOP00000006142	ENSAPOP00000001621	Nuclear cap binding protein subunit 1.	SR-related CTD-associated factor 4a.	0.814
NCBP1	supt5h	ENSAPOP00000006142	ENSAPOP00000010146	Nuclear cap binding protein subunit 1.	Transcription elongation factor SPT5.	0.815
NCBP1	xrn2	ENSAPOP00000006142	ENSAPOP00000026195	Nuclear cap binding protein subunit 1.	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.	0.679
exosc10	LOC110962292	ENSAPOP00000010733	ENSAPOP00000004916	Exosome component 10.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.875