Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
klf5Progesterone immunomodulatory binding factor 1. (511 aa)    
Predicted Functional Partners:
LOC110954476
E1A binding protein p300 a.
    
 0.851
LOC110968598
E1A binding protein p300 b.
    
 0.851
wwp1
WW domain containing E3 ubiquitin protein ligase 1.
    
 0.815
LOC110966678
WW domain containing E3 ubiquitin protein ligase 2.
    
 0.815
LOC110946580
CCAAT enhancer binding protein beta.
    
 0.793
ENSAPOP00000002565
CCAAT enhancer binding protein delta.
    
 0.751
LOC110948069
CREB binding protein a.
    
 0.719
crebbp
CREB binding protein b.
    
 0.719
bap1
Ubiquitin carboxyl-terminal hydrolase.
    
 0.700
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 
 0.698
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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