STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
olig3Oligodendrocyte transcription factor 3. (245 aa)    
Predicted Functional Partners:
pnrc2
Proline-rich nuclear receptor coactivator 2.
      
 0.668
LOC110950077
NK2 homeobox 2a.
   
 0.627
LOC110951614
NK2 homeobox 2b.
   
 0.627
LOC110948228
Myelin basic protein b.
   
  
 0.560
CNP
2',3'-cyclic nucleotide 3' phosphodiesterase.
      
 0.528
LOC110964996
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.527
LOC110953324
Atonal bHLH transcription factor 1a.
    
 
 0.520
tbx20
T-box transcription factor 20.
    
 
 0.481
LOC110970525
Hairy-related 12.
    
 0.468
irx3
Iroquois homeobox 3a.
    
 
 0.462
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.