STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arhgap45Rho GTPase activating protein 45b. (1226 aa)    
Predicted Functional Partners:
LOC110954134
Si:ch73-281f12.4.
    
 0.809
LOC110967157
Ras association and DIL domains.
    
 0.809
rasip1
Ras interacting protein 1.
    
 0.809
LOC110970692
Uncharacterized protein.
    
 0.809
LOC110958078
Ras homolog family member Ca.
    
 0.791
LOC110964518
Uncharacterized protein.
    
 0.791
RHOB
Ras homolog family member B.
    
 0.791
LOC110949650
Uncharacterized protein.
    
 0.791
LOC110959450
Uncharacterized protein.
    
 0.791
LOC110958145
Uncharacterized protein.
    
 0.791
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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