STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001650CTCK domain-containing protein. (116 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.889
LOC110963494
Mastermind-like transcriptional coactivator 1.
    
 0.881
NCSTN
Nicastrin.
    
 0.870
MSL2
MSL complex subunit 2.
    
 0.813
LOC110972616
MSL complex subunit 2.
    
 0.813
psenen
Presenilin enhancer, gamma-secretase subunit.
    
 0.799
LOC110955189
Protein S100; Belongs to the S-100 family.
    
 0.790
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.788
LOC110961546
Recombination signal binding protein for immunoglobulin kappa J region-like.
    
 0.788
LOC110954674
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.788
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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