STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110970190RNA binding motif protein 4.3. (339 aa)    
Predicted Functional Partners:
LOC110959966
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.824
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.824
ilf2
Interleukin enhancer binding factor 2.
   
 
 0.705
LOC110960639
TAR DNA binding protein.
   
 0.696
tardbp
TAR DNA binding protein, like.
   
 0.696
ENSAPOP00000001976
Heterogeneous nuclear ribonucleoprotein A0.
   
 0.676
LOC110965921
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.676
LOC110965923
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.676
HNRNPA0
Heterogeneous nuclear ribonucleoprotein A0.
   
 0.676
LOC110946803
Uncharacterized protein.
   
 0.676
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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