STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110955260Nicalin; May antagonize Nodal signaling and subsequent organization of axial structures during mesodermal patterning. (551 aa)    
Predicted Functional Partners:
ccdc47
Coiled-coil domain containing 47.
    
 
 0.929
tmem147
Transmembrane protein 147.
    
 
 0.923
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.916
rpl4
Ribosomal protein L4.
    
   0.854
rpl11
Ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.839
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.838
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
   0.837
rpl18a
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
    
   0.833
rpl36
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
    
   0.833
rpl29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
   0.833
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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