STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110961879T cell lymphoma invasion and metastasis 1a. (1672 aa)    
Predicted Functional Partners:
LOC110956736
Uncharacterized protein.
    
 0.953
RAC1
Rac family small GTPase 1.
    
 0.953
pard3
Par-3 family cell polarity regulator alpha, b.
    
 0.928
LOC110947878
T cell lymphoma invasion and metastasis 1b.
  
  
 
0.894
LOC110969864
Rac family small GTPase 2.
    
 0.884
LOC110966599
Rac family small GTPase 3b.
    
 0.884
cd44
CD44 molecule (Indian blood group) b.
    
 0.863
PARD3
Par-3 family cell polarity regulator.
    
 0.846
ENSAPOP00000033571
Par3_HAL_N_term domain-containing protein.
    
 0.846
mras
Muscle RAS oncogene homolog.
    
 0.842
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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