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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll1Tubulin tyrosine ligase-like family, member 1. (421 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
    
 0.957
tpgs2
Tubulin polyglutamylase complex subunit 2.
   
 0.947
tpgs1
Uncharacterized protein.
    
 0.922
nicn1
Nicolin 1.
   
 0.919
ENSAPOP00000006770
Uncharacterized protein.
    
 
 0.908
LOC110950376
Enhancer of mRNA decapping 3 homolog (S. cerevisiae).
    
 
 0.908
tbc1d19
TBC1 domain family, member 19.
   
 
 0.866
cunh11orf49
Zgc:92873.
    
 
 0.851
nudt12
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.837
kiaa1841
Si:ch211-189k9.2.
    
   0.740
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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