Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ttll1Tubulin tyrosine ligase-like family, member 1. (421 aa)    
Predicted Functional Partners:
tpgs1
Uncharacterized protein.
    
 0.994
nicn1
Nicolin 1.
   
 0.992
tpgs2
Tubulin polyglutamylase complex subunit 2.
   
 0.990
cunh11orf49
Zgc:92873.
    
 
 0.985
LRRC49
Leucine rich repeat containing 49.
    
 0.981
tbc1d19
TBC1 domain family, member 19.
   
 
 0.975
kiaa1841
Si:ch211-189k9.2.
   
   0.974
anapc2
Anaphase promoting complex subunit 2; Belongs to the cullin family.
   
   0.904
ttll12
Tubulin tyrosine ligase-like family, member 12.
      
 0.874
anapc4
Anaphase-promoting complex subunit 4; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin ligase that controls progression through mitosis and the G1 phase of the cell cycle. Belongs to the APC4 family.
    
   0.860
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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