STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001715Spectrin repeat containing, nuclear envelope family member 3. (775 aa)    
Predicted Functional Partners:
LOC110951928
Uncharacterized protein.
   
  0.779
LOC110949257
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
   
  0.779
LOC110964456
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
  0.748
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
  0.748
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 0.696
LOC110949986
Uncharacterized protein.
   
 0.683
LOC110958656
Vinculin a.
   
 0.683
ctnnal1
Catenin (cadherin-associated protein), alpha-like 1.
   
 0.683
ENSAPOP00000016299
Uncharacterized protein.
   
 0.683
vcl
Vinculin b.
   
 0.683
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.