Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001724DUF4757 domain-containing protein. (156 aa)    
Predicted Functional Partners:
ENSAPOP00000020861
Calponin-homology (CH) domain-containing protein.
 
 
 
  0.962
afdn
Afadin, adherens junction formation factor a.
   
  0.833
LOC110953218
Actinin, alpha 1.
   
 0.727
ACTN4
Uncharacterized protein.
   
 0.727
actn3
Actinin alpha 3b.
   
 0.727
LOC110954064
Actinin, alpha 2b.
   
 0.727
lmo7
LIM domain 7a.
   
 
  0.676
ENSAPOP00000034904
Uncharacterized protein.
   
 
  0.676
LOC110964987
Miff domain-containing protein.
    
 0.612
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
   0.612
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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