STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110965408BTB (POZ) domain containing 3a. (465 aa)    
Predicted Functional Partners:
LOC110960410
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.881
CUL3
Cullin 3; Belongs to the cullin family.
   
 0.881
cops2
COP9 signalosome subunit 2.
   
  0.858
cops3
COP9 signalosome subunit 3.
    
  0.857
COPS6
COP9 signalosome subunit 6.
    
  0.824
cops8
COP9 signalosome subunit 8.
    
  0.816
cops4
COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis).
    
  0.801
ENSAPOP00000018513
Uncharacterized protein.
    
  0.731
cops5
COP9 signalosome subunit 5.
    
  0.731
ENSAPOP00000031845
annotation not available
    
  0.731
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.