Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC110948297PHD-type domain-containing protein. (640 aa)    
Predicted Functional Partners:
ash2l
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.960
rbbp5
Retinoblastoma binding protein 5.
    
 0.957
dpy30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.930
LOC110951083
WD_REPEATS_REGION domain-containing protein.
   
 0.926
LOC110960657
WD repeat domain 82.
   
 0.926
setd1b
SET domain containing 1B, histone lysine methyltransferase a.
   
 0.925
setd1a
SET domain containing 1A, histone lysine methyltransferase.
   
 0.925
ENSAPOP00000022085
TFIIS central domain-containing protein.
 
     0.775
wdr5
WD repeat domain 5.
    
 0.709
hcfc1
Host cell factor C1a.
   
 0.649
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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