STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
celsr2Cadherin, EGF LAG seven-pass G-type receptor 2; Belongs to the G-protein coupled receptor 2 family. (3013 aa)    
Predicted Functional Partners:
LOC110967503
Vang-like protein.
    
 0.629
vangl2
Vang-like protein.
    
 0.629
VANGL1
Vang-like protein.
    
 0.624
PRICKLE1
Prickle homolog 1a.
   
 0.578
LOC110972162
Prickle homolog 1b.
   
 0.572
LOC110956452
Vang-like protein.
    
 0.558
prickle2
Prickle homolog 2b.
   
 0.525
pmpcb
Peptidase (mitochondrial processing) beta; Belongs to the peptidase M16 family.
 
   
  0.489
LOC110955287
Ubiquinol-cytochrome c reductase core protein 1.
 
   
  0.489
pmpca
Peptidase (mitochondrial processing) alpha; Belongs to the peptidase M16 family.
     
  0.489
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.