STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110959411CUB and zona pellucida-like domains 1, tandem duplicate 1. (517 aa)    
Predicted Functional Partners:
LOC110952548
Cell adhesion molecule 1a.
    
 0.690
ENSAPOP00000028818
C-type lectin domain-containing protein.
    
 0.668
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.665
ENSAPOP00000005471
Protein kinase domain-containing protein.
    
  0.654
ENSAPOP00000028536
Ig-like domain-containing protein.
    
  0.654
LOC110957895
Uncharacterized protein.
    
  0.654
il1b
Interleukin-1.
   
 0.637
LOC110956841
Interleukin; Belongs to the IL-15/IL-21 family.
    
 0.616
ENSAPOP00000001105
Zgc:112285; Belongs to the peptidase S1 family.
    
  0.604
corin
Corin, serine peptidase.
    
  0.604
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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