STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110958681SplA/ryanodine receptor domain and SOCS box containing 1. (273 aa)    
Predicted Functional Partners:
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.928
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.806
mycbp2
MYC binding protein 2.
    
 
 0.764
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.743
LOC110965797
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.743
cul1
Cullin 1b; Belongs to the cullin family.
   
 0.710
rnf7
Ring finger protein 7.
    
 0.701
pawr
PRKC, apoptosis, WT1, regulator.
    
 
 0.692
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.645
LOC110951859
Elongin B.
    
 0.595
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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