STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwc15CWC15 spliceosome associated protein homolog. (253 aa)    
Predicted Functional Partners:
bcas2
BCAS2 pre-mRNA processing factor.
   
 0.999
plrg1
Pleiotropic regulator 1.
   
 0.999
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 0.999
prpf19
Pre-mRNA processing factor 19.
    
 0.999
wbp11
WW domain binding protein 11.
   
  0.995
snw1
SNW domain containing 1.
   
 
 0.994
bud31
BUD31 homolog.
   
 
 0.994
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.992
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
    
 
 0.989
cdc40
Cell division cycle 40 homolog (S. cerevisiae).
   
 
 0.988
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.