STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPOP00000001757DUF3398 domain-containing protein. (135 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.818
LOC110951271
Cell division cycle 42.
   
 0.818
LOC110966235
Cell division cycle 42, like.
   
 0.722
LOC110961360
Uncharacterized protein.
   
 0.722
met
MET proto-oncogene, receptor tyrosine kinase.
   
 
  0.626
mst1r
Macrophage stimulating 1 receptor b.
   
 
  0.626
LOC110972771
Uncharacterized protein.
   
 
  0.626
LOC110969864
Rac family small GTPase 2.
   
 0.612
LOC110956736
Uncharacterized protein.
   
 0.612
LOC110966599
Rac family small GTPase 3b.
   
 0.612
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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