STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110953574BAH domain and coiled-coil containing 1b. (2659 aa)    
Predicted Functional Partners:
SINHCAF
SIN3-HDAC complex associated factor.
    
   0.669
LOC110961345
Uncharacterized protein.
    
   0.669
LOC110956824
SIN3-HDAC complex associated factor, like.
    
   0.599
sap30l
Sap30-like.
    
   0.567
ing3
Inhibitor of growth family, member 3.
    
 
 0.562
ing2
Inhibitor of growth protein.
    
 
 0.562
d2hgdh
D-2-hydroxyglutarate dehydrogenase.
    
 
 0.562
LOC110958174
Histone H3; Belongs to the histone H3 family.
    
 
 0.511
ENSAPOP00000004849
Histone domain-containing protein.
    
 
 0.511
ENSAPOP00000007484
Histone domain-containing protein.
    
 
 0.511
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.