STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC110964116Si:ch211-284f22.3. (304 aa)    
Predicted Functional Partners:
vps28
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.980
mvb12a
Uncharacterized protein.
   
 0.941
mvb12b
Multivesicular body subunit 12Ba.
   
 0.940
LOC110956060
Multivesicular body subunit 12Bb.
   
 0.940
uevld
UEV and lactate/malate dehyrogenase domains.
    
 0.910
LOC110948429
Zgc:123278.
    
 0.899
LOC110948428
Tumor susceptibility 101a.
    
 0.899
vps25
Vacuolar protein sorting 25 homolog.
    
 0.894
vps37a
VPS37A subunit of ESCRT-I.
     
0.893
LOC110968697
VPS37C subunit of ESCRT-I.
     
0.887
Your Current Organism:
Acanthochromis polyacanthus
NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.