LOC110949967 protein (Acanthochromis polyacanthus)

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

LOC110949967

Uncharacterized protein. (222 aa)

Predicted Functional Partners:

cd36

0.607

sytl5

0.573

ENSAPOP00000025732

0.573

sytl4

0.573

TMX3

0.564

LOC110963072

0.564

ENSAPOP00000009515

0.527

ENSAPOP00000009553

0.527

LOC110956308

0.526

LOC110960409

0.526

Your Current Organism:

Acanthochromis polyacanthus

NCBI taxonomy Id: 80966
Other names: A. polyacanthus, Acanthochromis polyacathus, spiny chromis, spiny damselfish

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAPOP00000009515	ENSAPOP00000009553	ENSAPOP00000009515	ENSAPOP00000009553	Uncharacterized protein.	RRM domain-containing protein.	0.713
ENSAPOP00000009515	LOC110949967	ENSAPOP00000009515	ENSAPOP00000001798	Uncharacterized protein.	Uncharacterized protein.	0.527
ENSAPOP00000009553	ENSAPOP00000009515	ENSAPOP00000009553	ENSAPOP00000009515	RRM domain-containing protein.	Uncharacterized protein.	0.713
ENSAPOP00000009553	LOC110949967	ENSAPOP00000009553	ENSAPOP00000001798	RRM domain-containing protein.	Uncharacterized protein.	0.527
ENSAPOP00000025732	LOC110949967	ENSAPOP00000025732	ENSAPOP00000001798	RabBD domain-containing protein.	Uncharacterized protein.	0.573
ENSAPOP00000025732	LOC110956308	ENSAPOP00000025732	ENSAPOP00000006169	RabBD domain-containing protein.	Protocadherin 1a.	0.459
ENSAPOP00000025732	LOC110960409	ENSAPOP00000025732	ENSAPOP00000007554	RabBD domain-containing protein.	Uncharacterized protein.	0.459
ENSAPOP00000025732	LOC110963072	ENSAPOP00000025732	ENSAPOP00000033578	RabBD domain-containing protein.	Thioredoxin domain-containing protein.	0.461
ENSAPOP00000025732	TMX3	ENSAPOP00000025732	ENSAPOP00000000346	RabBD domain-containing protein.	Thioredoxin related transmembrane protein 3.	0.461
ENSAPOP00000025732	cd36	ENSAPOP00000025732	ENSAPOP00000007057	RabBD domain-containing protein.	CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.	0.600
LOC110949967	ENSAPOP00000009515	ENSAPOP00000001798	ENSAPOP00000009515	Uncharacterized protein.	Uncharacterized protein.	0.527
LOC110949967	ENSAPOP00000009553	ENSAPOP00000001798	ENSAPOP00000009553	Uncharacterized protein.	RRM domain-containing protein.	0.527
LOC110949967	ENSAPOP00000025732	ENSAPOP00000001798	ENSAPOP00000025732	Uncharacterized protein.	RabBD domain-containing protein.	0.573
LOC110949967	LOC110956308	ENSAPOP00000001798	ENSAPOP00000006169	Uncharacterized protein.	Protocadherin 1a.	0.526
LOC110949967	LOC110960409	ENSAPOP00000001798	ENSAPOP00000007554	Uncharacterized protein.	Uncharacterized protein.	0.526
LOC110949967	LOC110963072	ENSAPOP00000001798	ENSAPOP00000033578	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.564
LOC110949967	TMX3	ENSAPOP00000001798	ENSAPOP00000000346	Uncharacterized protein.	Thioredoxin related transmembrane protein 3.	0.564
LOC110949967	cd36	ENSAPOP00000001798	ENSAPOP00000007057	Uncharacterized protein.	CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.	0.607
LOC110949967	sytl4	ENSAPOP00000001798	ENSAPOP00000027440	Uncharacterized protein.	Synaptotagmin-like 4.	0.573
LOC110949967	sytl5	ENSAPOP00000001798	ENSAPOP00000006050	Uncharacterized protein.	Synaptotagmin-like 5.	0.573